To Vcf Converter: Json

References:

Converting JSON data to VCF format is often necessary when working with genetic data stored in JSON format, such as data from the JSON-based format used by the Genome Analysis Toolkit (GATK) . There are several tools and libraries available for this conversion. json to vcf converter

JSON (JavaScript Object Notation) is a lightweight data interchange format that's easy to read and write. It's commonly used for data exchange between web servers, web applications, and mobile apps. References: Converting JSON data to VCF format is

vcf_writer.close() Note that this example assumes a simple JSON structure with a list of variants, each containing chr , pos , ref , and alt fields. each containing chr

# Create a VCF writer vcf_writer = vcf.Writer(open('output.vcf', 'w'), vcf.VCFHeader())